# Auto generated from reporting.yaml by pythongen.py version: 0.9.0
# Generation date: 2021-09-01 20:03
# Schema: reporting
#
# id: https://w3id.org/linkml/reporting
# description: A datamodel for reports on data
# license: https://creativecommons.org/publicdomain/zero/1.0/
import dataclasses
import sys
import re
from jsonasobj2 import JsonObj, as_dict
from typing import Optional, List, Union, Dict, ClassVar, Any
from dataclasses import dataclass
from linkml_runtime.linkml_model.meta import EnumDefinition, PermissibleValue, PvFormulaOptions
from linkml_runtime.utils.slot import Slot
from linkml_runtime.utils.metamodelcore import empty_list, empty_dict, bnode
from linkml_runtime.utils.yamlutils import YAMLRoot, extended_str, extended_float, extended_int
from linkml_runtime.utils.dataclass_extensions_376 import dataclasses_init_fn_with_kwargs
from linkml_runtime.utils.formatutils import camelcase, underscore, sfx
from linkml_runtime.utils.enumerations import EnumDefinitionImpl
from rdflib import Namespace, URIRef
from linkml_runtime.utils.curienamespace import CurieNamespace
from linkml_runtime.linkml_model.types import Nodeidentifier, String, Uriorcurie
from linkml_runtime.utils.metamodelcore import NodeIdentifier, URIorCURIE
metamodel_version = "1.7.0"
# Overwrite dataclasses _init_fn to add **kwargs in __init__
dataclasses._init_fn = dataclasses_init_fn_with_kwargs
# Namespaces
LINKML = CurieNamespace('linkml', 'https://w3id.org/linkml/')
OWL = CurieNamespace('owl', 'http://www.w3.org/2002/07/owl#')
PAV = CurieNamespace('pav', 'http://purl.org/pav/')
RDF = CurieNamespace('rdf', 'http://www.w3.org/1999/02/22-rdf-syntax-ns#')
RDFS = CurieNamespace('rdfs', 'http://www.w3.org/2000/01/rdf-schema#')
REPORTING = CurieNamespace('reporting', 'https://w3id.org/linkml/report')
SCHEMA = CurieNamespace('schema', 'http://schema.org/')
SKOS = CurieNamespace('skos', 'http://www.w3.org/2004/02/skos/core#')
XSD = CurieNamespace('xsd', 'http://www.w3.org/2001/XMLSchema#')
DEFAULT_ = REPORTING
# Types
# Class references
[docs]@dataclass
class Report(YAMLRoot):
"""
A report object
"""
_inherited_slots: ClassVar[List[str]] = []
class_class_uri: ClassVar[URIRef] = REPORTING.Report
class_class_curie: ClassVar[str] = "reporting:Report"
class_name: ClassVar[str] = "report"
class_model_uri: ClassVar[URIRef] = REPORTING.Report
results: Optional[Union[Union[dict, "CheckResult"], List[Union[dict, "CheckResult"]]]] = empty_list()
def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]):
if not isinstance(self.results, list):
self.results = [self.results] if self.results is not None else []
self.results = [v if isinstance(v, CheckResult) else CheckResult(**as_dict(v)) for v in self.results]
super().__post_init__(**kwargs)
[docs]@dataclass
class CheckResult(YAMLRoot):
"""
An individual check
"""
_inherited_slots: ClassVar[List[str]] = []
class_class_uri: ClassVar[URIRef] = REPORTING.CheckResult
class_class_curie: ClassVar[str] = "reporting:CheckResult"
class_name: ClassVar[str] = "check_result"
class_model_uri: ClassVar[URIRef] = REPORTING.CheckResult
type: Optional[Union[str, URIorCURIE]] = None
subject: Optional[Union[str, NodeIdentifier]] = None
instantiates: Optional[Union[str, NodeIdentifier]] = None
predicate: Optional[Union[str, NodeIdentifier]] = None
object: Optional[Union[str, NodeIdentifier]] = None
object_str: Optional[str] = None
source: Optional[Union[str, NodeIdentifier]] = None
info: Optional[str] = None
def __post_init__(self, *_: List[str], **kwargs: Dict[str, Any]):
if self.type is not None and not isinstance(self.type, URIorCURIE):
self.type = URIorCURIE(self.type)
if self.subject is not None and not isinstance(self.subject, NodeIdentifier):
self.subject = NodeIdentifier(self.subject)
if self.instantiates is not None and not isinstance(self.instantiates, NodeIdentifier):
self.instantiates = NodeIdentifier(self.instantiates)
if self.predicate is not None and not isinstance(self.predicate, NodeIdentifier):
self.predicate = NodeIdentifier(self.predicate)
if self.object is not None and not isinstance(self.object, NodeIdentifier):
self.object = NodeIdentifier(self.object)
if self.object_str is not None and not isinstance(self.object_str, str):
self.object_str = str(self.object_str)
if self.source is not None and not isinstance(self.source, NodeIdentifier):
self.source = NodeIdentifier(self.source)
if self.info is not None and not isinstance(self.info, str):
self.info = str(self.info)
super().__post_init__(**kwargs)
[docs]class Problem(CheckResult):
_inherited_slots: ClassVar[List[str]] = []
class_class_uri: ClassVar[URIRef] = REPORTING.Problem
class_class_curie: ClassVar[str] = "reporting:Problem"
class_name: ClassVar[str] = "problem"
class_model_uri: ClassVar[URIRef] = REPORTING.Problem
[docs]class ProblemSlotUndeclared(Problem):
"""
A problem in which an undeclared slot is used
"""
_inherited_slots: ClassVar[List[str]] = []
class_class_uri: ClassVar[URIRef] = REPORTING.ProblemSlotUndeclared
class_class_curie: ClassVar[str] = "reporting:ProblemSlotUndeclared"
class_name: ClassVar[str] = "problem_slot_undeclared"
class_model_uri: ClassVar[URIRef] = REPORTING.ProblemSlotUndeclared
[docs]class ProblemSlotInapplicable(Problem):
"""
A problem in which a slot is used in an instance of a class where the slot is not applicable for that class
"""
_inherited_slots: ClassVar[List[str]] = []
class_class_uri: ClassVar[URIRef] = REPORTING.ProblemSlotInapplicable
class_class_curie: ClassVar[str] = "reporting:ProblemSlotInapplicable"
class_name: ClassVar[str] = "problem_slot_inapplicable"
class_model_uri: ClassVar[URIRef] = REPORTING.ProblemSlotInapplicable
[docs]class ProblemSlotMissing(Problem):
"""
A problem in which an instance of a class has a required slot which is not filled in
"""
_inherited_slots: ClassVar[List[str]] = []
class_class_uri: ClassVar[URIRef] = REPORTING.ProblemSlotMissing
class_class_curie: ClassVar[str] = "reporting:ProblemSlotMissing"
class_name: ClassVar[str] = "problem_slot_missing"
class_model_uri: ClassVar[URIRef] = REPORTING.ProblemSlotMissing
# Enumerations
[docs]class SeverityOptions(EnumDefinitionImpl):
FATAL = PermissibleValue(text="FATAL")
ERROR = PermissibleValue(text="ERROR")
WARNING = PermissibleValue(text="WARNING")
INFO = PermissibleValue(text="INFO")
_defn = EnumDefinition(
name="SeverityOptions",
)
# Slots
slots.type = Slot(uri=REPORTING.type, name="type", curie=REPORTING.curie('type'),
model_uri=REPORTING.type, domain=None, range=Optional[Union[str, URIorCURIE]])
slots.subject = Slot(uri=REPORTING.subject, name="subject", curie=REPORTING.curie('subject'),
model_uri=REPORTING.subject, domain=None, range=Optional[Union[str, NodeIdentifier]])
slots.instantiates = Slot(uri=REPORTING.instantiates, name="instantiates", curie=REPORTING.curie('instantiates'),
model_uri=REPORTING.instantiates, domain=None, range=Optional[Union[str, NodeIdentifier]])
slots.predicate = Slot(uri=REPORTING.predicate, name="predicate", curie=REPORTING.curie('predicate'),
model_uri=REPORTING.predicate, domain=None, range=Optional[Union[str, NodeIdentifier]])
slots.object = Slot(uri=REPORTING.object, name="object", curie=REPORTING.curie('object'),
model_uri=REPORTING.object, domain=None, range=Optional[Union[str, NodeIdentifier]])
slots.object_str = Slot(uri=REPORTING.object_str, name="object_str", curie=REPORTING.curie('object_str'),
model_uri=REPORTING.object_str, domain=None, range=Optional[str])
slots.source = Slot(uri=REPORTING.source, name="source", curie=REPORTING.curie('source'),
model_uri=REPORTING.source, domain=None, range=Optional[Union[str, NodeIdentifier]])
slots.severity = Slot(uri=REPORTING.severity, name="severity", curie=REPORTING.curie('severity'),
model_uri=REPORTING.severity, domain=None, range=Optional[Union[str, "SeverityOptions"]])
slots.info = Slot(uri=REPORTING.info, name="info", curie=REPORTING.curie('info'),
model_uri=REPORTING.info, domain=None, range=Optional[str])
slots.report__results = Slot(uri=REPORTING.results, name="report__results", curie=REPORTING.curie('results'),
model_uri=REPORTING.report__results, domain=None, range=Optional[Union[Union[dict, CheckResult], List[Union[dict, CheckResult]]]])